WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48D5.1b.1 Sequence Name  C48D5.1b.1
Length (nt)  1825   Chromosome Location  III: 3573851-3578390
Chromosome . Primary Identifier  III Chromosome Location . Start  3573851
Chromosome Location . End  3578390 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003605 nhr-6 C48D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D5.1b C48D5.1b 1452   III: 3576353-3576468

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48D5.1b.1 3573851 3578390 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83412   73   III: 3573851-3573923 Caenorhabditis elegans
Exon83415   103   III: 3574148-3574250 Caenorhabditis elegans
Exon83417   83   III: 3574294-3574376 Caenorhabditis elegans
Exon83420   78   III: 3576192-3576269 Caenorhabditis elegans
Exon83422   152   III: 3576317-3576468 Caenorhabditis elegans
Exon83425   195   III: 3576609-3576803 Caenorhabditis elegans
Exon83428   290   III: 3576870-3577159 Caenorhabditis elegans
Exon83431   158   III: 3577205-3577362 Caenorhabditis elegans
Exon83434   361   III: 3577410-3577770 Caenorhabditis elegans
Exon83437   122   III: 3577848-3577969 Caenorhabditis elegans
Exon83439   210   III: 3578181-3578390 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48D5.1b.1 3573851 3578390 1

1 Sequence

Length
1825

1 Sequence Ontology Term

Identifier Name Description
transcript