WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48D5.1a.1 Sequence Name  C48D5.1a.1
Length (nt)  2359   Chromosome Location  III: 3573581-3578771
Chromosome . Primary Identifier  III Chromosome Location . Start  3573581
Chromosome Location . End  3578771 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003605 nhr-6 C48D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D5.1a C48D5.1a 1860   III: 3573699-3573740

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48D5.1a.1 3573581 3578771 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83410   160   III: 3573581-3573740 Caenorhabditis elegans
Exon83413   66   III: 3573858-3573923 Caenorhabditis elegans
Exon83414   103   III: 3574148-3574250 Caenorhabditis elegans
Exon83416   83   III: 3574294-3574376 Caenorhabditis elegans
Exon83419   78   III: 3576192-3576269 Caenorhabditis elegans
Exon83421   152   III: 3576317-3576468 Caenorhabditis elegans
Exon83424   195   III: 3576609-3576803 Caenorhabditis elegans
Exon83427   290   III: 3576870-3577159 Caenorhabditis elegans
Exon83430   158   III: 3577205-3577362 Caenorhabditis elegans
Exon83433   361   III: 3577410-3577770 Caenorhabditis elegans
Exon83436   122   III: 3577848-3577969 Caenorhabditis elegans
Exon83441   591   III: 3578181-3578771 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48D5.1a.1 3573581 3578771 1

1 Sequence

Length
2359

1 Sequence Ontology Term

Identifier Name Description
transcript