WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54C6.4a.1 Sequence Name  C54C6.4a.1
Length (nt)  912   Chromosome Location  III: 3553649-3556627
Chromosome . Primary Identifier  III Chromosome Location . Start  3553649
Chromosome Location . End  3556627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008286 C54C6.4 C54C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C6.4a C54C6.4a 912   III: 3553649-3553779

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54C6.4a.1 3553649 3556627 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83394   131   III: 3553649-3553779 Caenorhabditis elegans
Exon83396   149   III: 3553836-3553984 Caenorhabditis elegans
Exon83398   101   III: 3554781-3554881 Caenorhabditis elegans
Exon83399   93   III: 3554927-3555019 Caenorhabditis elegans
Exon83401   110   III: 3555076-3555185 Caenorhabditis elegans
Exon83403   148   III: 3556185-3556332 Caenorhabditis elegans
Exon83405   90   III: 3556391-3556480 Caenorhabditis elegans
Exon83407   90   III: 3556538-3556627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54C6.4a.1 3553649 3556627 1

1 Sequence

Length
912

1 Sequence Ontology Term

Identifier Name Description
transcript