WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54C6.2.1 Sequence Name  C54C6.2.1
Length (nt)  2065   Chromosome Location  III: 3537642-3541639
Chromosome . Primary Identifier  III Chromosome Location . Start  3537642
Chromosome Location . End  3541639 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54C6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54C6.2 C54C6.2 1335   III: 3538326-3538501

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54C6.2.1 3537642 3541639 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83376   860   III: 3537642-3538501 Caenorhabditis elegans
Exon83379   474   III: 3539311-3539784 Caenorhabditis elegans
Exon83380   163   III: 3539842-3540004 Caenorhabditis elegans
Exon83381   356   III: 3540057-3540412 Caenorhabditis elegans
Exon83383   212   III: 3541428-3541639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54C6.2.1 3537642 3541639 -1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript