WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53G8AL.1.1 Sequence Name  Y53G8AL.1.1
Length (nt)  3460   Chromosome Location  III: 3233102-3241375
Chromosome . Primary Identifier  III Chromosome Location . Start  3233102
Chromosome Location . End  3241375 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8AL.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021799 Y53G8AL.1 Y53G8AL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53G8AL.1 Y53G8AL.1 3348   III: 3233102-3233200

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AL.1.1 3233102 3241375 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82683   99   III: 3233102-3233200 Caenorhabditis elegans
Exon82684   117   III: 3233534-3233650 Caenorhabditis elegans
Exon82685   189   III: 3233718-3233906 Caenorhabditis elegans
Exon82687   216   III: 3234235-3234450 Caenorhabditis elegans
Exon82688   327   III: 3234817-3235143 Caenorhabditis elegans
Exon82689   228   III: 3235737-3235964 Caenorhabditis elegans
Exon82690   84   III: 3236984-3237067 Caenorhabditis elegans
Exon82691   237   III: 3237200-3237436 Caenorhabditis elegans
Exon82692   405   III: 3237801-3238205 Caenorhabditis elegans
Exon82693   1338   III: 3238937-3240274 Caenorhabditis elegans
Exon82694   220   III: 3241156-3241375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53G8AL.1.1 3233102 3241375 1

1 Sequence

Length
3460

1 Sequence Ontology Term

Identifier Name Description
transcript