WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53G8B.4a.1 Sequence Name  Y53G8B.4a.1
Length (nt)  1646   Chromosome Location  III: 3112428-3127124
Chromosome . Primary Identifier  III Chromosome Location . Start  3112428
Chromosome Location . End  3127124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53G8B.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021820 nipa-1 Y53G8B.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53G8B.4a Y53G8B.4a 1194   III: 3112852-3113019

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y53G8B.4a.1 3112428 3127124 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82515   592   III: 3112428-3113019 Caenorhabditis elegans
Exon82518   273   III: 3113771-3114043 Caenorhabditis elegans
Exon82520   325   III: 3114678-3115002 Caenorhabditis elegans
Exon82522   91   III: 3115543-3115633 Caenorhabditis elegans
Exon82524   192   III: 3116150-3116341 Caenorhabditis elegans
Exon82527   89   III: 3116918-3117006 Caenorhabditis elegans
Exon82528   84   III: 3127041-3127124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y53G8B.4a.1 3112428 3127124 -1

1 Sequence

Length
1646

1 Sequence Ontology Term

Identifier Name Description
transcript