WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55D5A.5d.1 Sequence Name  Y55D5A.5d.1
Length (nt)  5400   Chromosome Location  III: 2995919-3023097
Chromosome . Primary Identifier  III Chromosome Location . Start  2995919
Chromosome Location . End  3023097 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D5A.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55D5A.5d Y55D5A.5d 5400   III: 2995919-2996014

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5d.1 2995919 3023097 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82258   96   III: 2995919-2996014 Caenorhabditis elegans
Exon82262   276   III: 2997060-2997335 Caenorhabditis elegans
Exon82269   186   III: 2998662-2998847 Caenorhabditis elegans
Exon82277   1531   III: 2999852-3001382 Caenorhabditis elegans
Exon82283   335   III: 3004566-3004900 Caenorhabditis elegans
Exon82289   346   III: 3005692-3006037 Caenorhabditis elegans
Exon82296   283   III: 3008610-3008892 Caenorhabditis elegans
Exon82303   113   III: 3010411-3010523 Caenorhabditis elegans
Exon82308   1393   III: 3012186-3013578 Caenorhabditis elegans
Exon82313   169   III: 3014588-3014756 Caenorhabditis elegans
Exon82318   106   III: 3015363-3015468 Caenorhabditis elegans
Exon82323   177   III: 3016166-3016342 Caenorhabditis elegans
Exon82328   122   III: 3016921-3017042 Caenorhabditis elegans
Exon82333   132   III: 3019170-3019301 Caenorhabditis elegans
Exon82339   115   III: 3019559-3019673 Caenorhabditis elegans
Exon82341   20   III: 3023078-3023097 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5d.1 2995919 3023097 -1

1 Sequence

Length
5400

1 Sequence Ontology Term

Identifier Name Description
transcript