WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55D5A.5e.1 Sequence Name  Y55D5A.5e.1
Length (nt)  5313   Chromosome Location  III: 2995919-3019606
Chromosome . Primary Identifier  III Chromosome Location . Start  2995919
Chromosome Location . End  3019606 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D5A.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55D5A.5e Y55D5A.5e 5313   III: 2995919-2996014

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5e.1 2995919 3019606 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82257   96   III: 2995919-2996014 Caenorhabditis elegans
Exon82263   276   III: 2997060-2997335 Caenorhabditis elegans
Exon82270   186   III: 2998662-2998847 Caenorhabditis elegans
Exon82278   1531   III: 2999852-3001382 Caenorhabditis elegans
Exon82284   335   III: 3004566-3004900 Caenorhabditis elegans
Exon82290   346   III: 3005692-3006037 Caenorhabditis elegans
Exon82297   283   III: 3008610-3008892 Caenorhabditis elegans
Exon82304   113   III: 3010411-3010523 Caenorhabditis elegans
Exon82309   1393   III: 3012186-3013578 Caenorhabditis elegans
Exon82314   169   III: 3014588-3014756 Caenorhabditis elegans
Exon82319   106   III: 3015363-3015468 Caenorhabditis elegans
Exon82324   177   III: 3016166-3016342 Caenorhabditis elegans
Exon82329   122   III: 3016921-3017042 Caenorhabditis elegans
Exon82334   132   III: 3019170-3019301 Caenorhabditis elegans
Exon82336   48   III: 3019559-3019606 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55D5A.5e.1 2995919 3019606 -1

1 Sequence

Length
5313

1 Sequence Ontology Term

Identifier Name Description
transcript