WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55D5A.5c.1 Sequence Name  Y55D5A.5c.1
Length (nt)  7325   Chromosome Location  III: 2994544-3040846
Chromosome . Primary Identifier  III Chromosome Location . Start  2994544
Chromosome Location . End  3040846 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D5A.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55D5A.5c Y55D5A.5c 5787   III: 2995919-2996014

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55D5A.5c.1 2994544 3040846 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82254   1471   III: 2994544-2996014 Caenorhabditis elegans
Exon82261   276   III: 2997060-2997335 Caenorhabditis elegans
Exon82268   186   III: 2998662-2998847 Caenorhabditis elegans
Exon82276   1531   III: 2999852-3001382 Caenorhabditis elegans
Exon82282   335   III: 3004566-3004900 Caenorhabditis elegans
Exon82288   346   III: 3005692-3006037 Caenorhabditis elegans
Exon82293   246   III: 3006979-3007224 Caenorhabditis elegans
Exon82295   283   III: 3008610-3008892 Caenorhabditis elegans
Exon82302   113   III: 3010411-3010523 Caenorhabditis elegans
Exon82307   1393   III: 3012186-3013578 Caenorhabditis elegans
Exon82312   169   III: 3014588-3014756 Caenorhabditis elegans
Exon82317   106   III: 3015363-3015468 Caenorhabditis elegans
Exon82322   177   III: 3016166-3016342 Caenorhabditis elegans
Exon82327   122   III: 3016921-3017042 Caenorhabditis elegans
Exon82332   132   III: 3019170-3019301 Caenorhabditis elegans
Exon82338   115   III: 3019559-3019673 Caenorhabditis elegans
Exon82343   97   III: 3023078-3023174 Caenorhabditis elegans
Exon82347   162   III: 3028639-3028800 Caenorhabditis elegans
Exon82349   65   III: 3040782-3040846 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55D5A.5c.1 2994544 3040846 -1

1 Sequence

Length
7325

1 Sequence Ontology Term

Identifier Name Description
transcript