WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55D5A.1a.1 Sequence Name  Y55D5A.1a.1
Length (nt)  1080   Chromosome Location  III: 2982414-2988150
Chromosome . Primary Identifier  III Chromosome Location . Start  2982414
Chromosome Location . End  2988150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D5A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021915 Y55D5A.1 Y55D5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55D5A.1a Y55D5A.1a 858   III: 2982471-2982496

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55D5A.1a.1 2982414 2988150 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82226   83   III: 2982414-2982496 Caenorhabditis elegans
Exon82228   148   III: 2984312-2984459 Caenorhabditis elegans
Exon82231   119   III: 2984965-2985083 Caenorhabditis elegans
Exon82235   118   III: 2986009-2986126 Caenorhabditis elegans
Exon82239   369   III: 2987064-2987432 Caenorhabditis elegans
Exon82248   243   III: 2987908-2988150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55D5A.1a.1 2982414 2988150 1

1 Sequence

Length
1080

1 Sequence Ontology Term

Identifier Name Description
transcript