WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05C05.1c.1 Sequence Name  H05C05.1c.1
Length (nt)  2712   Chromosome Location  III: 2947118-2960574
Chromosome . Primary Identifier  III Chromosome Location . Start  2947118
Chromosome Location . End  2960574 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05C05.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019157 H05C05.1 H05C05.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05C05.1c H05C05.1c 2712   III: 2947118-2947175

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H05C05.1c.1 2947118 2960574 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82181   58   III: 2947118-2947175 Caenorhabditis elegans
Exon82182   203   III: 2949621-2949823 Caenorhabditis elegans
Exon82185   60   III: 2950733-2950792 Caenorhabditis elegans
Exon82187   509   III: 2951679-2952187 Caenorhabditis elegans
Exon82189   62   III: 2953663-2953724 Caenorhabditis elegans
Exon82191   62   III: 2953777-2953838 Caenorhabditis elegans
Exon82193   539   III: 2955061-2955599 Caenorhabditis elegans
Exon82196   159   III: 2957013-2957171 Caenorhabditis elegans
Exon82198   106   III: 2957349-2957454 Caenorhabditis elegans
Exon82200   630   III: 2958233-2958862 Caenorhabditis elegans
Exon82201   324   III: 2960251-2960574 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H05C05.1c.1 2947118 2960574 1

1 Sequence

Length
2712

1 Sequence Ontology Term

Identifier Name Description
transcript