WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10F2.1.1 Sequence Name  R10F2.1.1
Length (nt)  8808   Chromosome Location  III: 2910906-2935961
Chromosome . Primary Identifier  III Chromosome Location . Start  2910906
Chromosome Location . End  2935961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10F2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019994 cdh-1 R10F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10F2.1 R10F2.1 8340   III: 2910970-2911170

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10F2.1.1 2910906 2935961 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82133   265   III: 2910906-2911170 Caenorhabditis elegans
Exon82134   183   III: 2914828-2915010 Caenorhabditis elegans
Exon82135   129   III: 2915459-2915587 Caenorhabditis elegans
Exon82136   125   III: 2915636-2915760 Caenorhabditis elegans
Exon82137   404   III: 2916482-2916885 Caenorhabditis elegans
Exon82138   449   III: 2917449-2917897 Caenorhabditis elegans
Exon82139   84   III: 2917945-2918028 Caenorhabditis elegans
Exon82140   108   III: 2918663-2918770 Caenorhabditis elegans
Exon82151   69   III: 2925284-2925352 Caenorhabditis elegans
Exon82152   103   III: 2925781-2925883 Caenorhabditis elegans
Exon82153   242   III: 2926060-2926301 Caenorhabditis elegans
Exon82154   1863   III: 2927213-2929075 Caenorhabditis elegans
Exon82155   2450   III: 2929125-2931574 Caenorhabditis elegans
Exon82156   745   III: 2932023-2932767 Caenorhabditis elegans
Exon82158   195   III: 2933340-2933534 Caenorhabditis elegans
Exon82159   138   III: 2933587-2933724 Caenorhabditis elegans
Exon82160   345   III: 2933775-2934119 Caenorhabditis elegans
Exon82161   245   III: 2934413-2934657 Caenorhabditis elegans
Exon82162   127   III: 2935018-2935144 Caenorhabditis elegans
Exon82163   539   III: 2935423-2935961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10F2.1.1 2910906 2935961 1

1 Sequence

Length
8808

1 Sequence Ontology Term

Identifier Name Description
transcript