WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54F10AM.1.1 Sequence Name  Y54F10AM.1.1
Length (nt)  828   Chromosome Location  III: 2561710-2566595
Chromosome . Primary Identifier  III Chromosome Location . Start  2561710
Chromosome Location . End  2566595 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10AM.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021848 nhr-239 Y54F10AM.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54F10AM.1 Y54F10AM.1 789   III: 2561710-2561713

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54F10AM.1.1 2561710 2566595 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81566   4   III: 2561710-2561713 Caenorhabditis elegans
Exon81567   141   III: 2562213-2562353 Caenorhabditis elegans
Exon81568   96   III: 2562401-2562496 Caenorhabditis elegans
Exon81571   78   III: 2565355-2565432 Caenorhabditis elegans
Exon81572   164   III: 2565984-2566147 Caenorhabditis elegans
Exon81573   82   III: 2566194-2566275 Caenorhabditis elegans
Exon81574   263   III: 2566333-2566595 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54F10AM.1.1 2561710 2566595 1

1 Sequence

Length
828

1 Sequence Ontology Term

Identifier Name Description
transcript