WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54F10BM.1.1 Sequence Name  Y54F10BM.1.1
Length (nt)  3527   Chromosome Location  III: 2331572-2343223
Chromosome . Primary Identifier  III Chromosome Location . Start  2331572
Chromosome Location . End  2343223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54F10BM.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021856 ppm-1.D Y54F10BM.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54F10BM.1 Y54F10BM.1 2301   III: 2331581-2331661

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54F10BM.1.1 2331572 2343223 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon81094   90   III: 2331572-2331661 Caenorhabditis elegans
Exon81095   153   III: 2332003-2332155 Caenorhabditis elegans
Exon81096   97   III: 2332200-2332296 Caenorhabditis elegans
Exon81097   132   III: 2333086-2333217 Caenorhabditis elegans
Exon81098   309   III: 2334118-2334426 Caenorhabditis elegans
Exon81099   299   III: 2335284-2335582 Caenorhabditis elegans
Exon81100   390   III: 2336688-2337077 Caenorhabditis elegans
Exon81101   241   III: 2337934-2338174 Caenorhabditis elegans
Exon81102   320   III: 2340015-2340334 Caenorhabditis elegans
Exon81103   1496   III: 2341728-2343223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54F10BM.1.1 2331572 2343223 1

1 Sequence

Length
3527

1 Sequence Ontology Term

Identifier Name Description
transcript