WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G9A.3.1 Sequence Name  Y48G9A.3.1
Length (nt)  8158   Chromosome Location  III: 2151945-2197908
Chromosome . Primary Identifier  III Chromosome Location . Start  2151945
Chromosome Location . End  2197908 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021697 gcn-1 Y48G9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G9A.3 Y48G9A.3 7905   III: 2151984-2152043

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.3.1 2151945 2197908 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80854   99   III: 2151945-2152043 Caenorhabditis elegans
Exon80855   204   III: 2152236-2152439 Caenorhabditis elegans
Exon80856   931   III: 2154219-2155149 Caenorhabditis elegans
Exon80857   165   III: 2156398-2156562 Caenorhabditis elegans
Exon80858   185   III: 2157646-2157830 Caenorhabditis elegans
Exon80860   301   III: 2161721-2162021 Caenorhabditis elegans
Exon80861   271   III: 2163254-2163524 Caenorhabditis elegans
Exon80862   183   III: 2164736-2164918 Caenorhabditis elegans
Exon80863   72   III: 2166329-2166400 Caenorhabditis elegans
Exon80864   189   III: 2166690-2166878 Caenorhabditis elegans
Exon80865   122   III: 2168027-2168148 Caenorhabditis elegans
Exon80878   390   III: 2174578-2174967 Caenorhabditis elegans
Exon80879   342   III: 2176625-2176966 Caenorhabditis elegans
Exon80881   560   III: 2178449-2179008 Caenorhabditis elegans
Exon80882   244   III: 2180725-2180968 Caenorhabditis elegans
Exon80883   239   III: 2182169-2182407 Caenorhabditis elegans
Exon80884   141   III: 2183155-2183295 Caenorhabditis elegans
Exon80885   289   III: 2184284-2184572 Caenorhabditis elegans
Exon80886   403   III: 2185580-2185982 Caenorhabditis elegans
Exon80887   241   III: 2188003-2188243 Caenorhabditis elegans
Exon80888   478   III: 2189303-2189780 Caenorhabditis elegans
Exon80889   223   III: 2190990-2191212 Caenorhabditis elegans
Exon80890   419   III: 2192296-2192714 Caenorhabditis elegans
Exon80891   445   III: 2193417-2193861 Caenorhabditis elegans
Exon80892   227   III: 2194508-2194734 Caenorhabditis elegans
Exon80893   238   III: 2195323-2195560 Caenorhabditis elegans
Exon80894   214   III: 2196569-2196782 Caenorhabditis elegans
Exon80895   343   III: 2197566-2197908 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.3.1 2151945 2197908 1

1 Sequence

Length
8158

1 Sequence Ontology Term

Identifier Name Description
transcript