WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G9A.4a.1 Sequence Name  Y48G9A.4a.1
Length (nt)  3691   Chromosome Location  III: 2134746-2151554
Chromosome . Primary Identifier  III Chromosome Location . Start  2134746
Chromosome Location . End  2151554 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021698 frl-1 Y48G9A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G9A.4a Y48G9A.4a 3348   III: 2134746-2134820

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.4a.1 2134746 2151554 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80828   75   III: 2134746-2134820 Caenorhabditis elegans
Exon80829   254   III: 2136412-2136665 Caenorhabditis elegans
Exon80831   281   III: 2137304-2137584 Caenorhabditis elegans
Exon80833   181   III: 2138320-2138500 Caenorhabditis elegans
Exon80838   241   III: 2140092-2140332 Caenorhabditis elegans
Exon80840   421   III: 2141364-2141784 Caenorhabditis elegans
Exon80842   260   III: 2143530-2143789 Caenorhabditis elegans
Exon80844   415   III: 2145622-2146036 Caenorhabditis elegans
Exon80846   539   III: 2147433-2147971 Caenorhabditis elegans
Exon80848   357   III: 2148883-2149239 Caenorhabditis elegans
Exon80850   187   III: 2150155-2150341 Caenorhabditis elegans
Exon80853   480   III: 2151075-2151554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G9A.4a.1 2134746 2151554 1

1 Sequence

Length
3691

1 Sequence Ontology Term

Identifier Name Description
transcript