WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G9A.11.1 Sequence Name  Y48G9A.11.1
Length (nt)  1148   Chromosome Location  III: 2112416-2116897
Chromosome . Primary Identifier  III Chromosome Location . Start  2112416
Chromosome Location . End  2116897 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021704 Y48G9A.11 Y48G9A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G9A.11 Y48G9A.11 1056   III: 2112494-2112553

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G9A.11.1 2112416 2116897 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80806   138   III: 2112416-2112553 Caenorhabditis elegans
Exon80807   125   III: 2113088-2113212 Caenorhabditis elegans
Exon80809   146   III: 2114787-2114932 Caenorhabditis elegans
Exon80810   129   III: 2115103-2115231 Caenorhabditis elegans
Exon80811   83   III: 2115908-2115990 Caenorhabditis elegans
Exon80812   148   III: 2116201-2116348 Caenorhabditis elegans
Exon80813   98   III: 2116402-2116499 Caenorhabditis elegans
Exon80814   189   III: 2116566-2116754 Caenorhabditis elegans
Exon80815   92   III: 2116806-2116897 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G9A.11.1 2112416 2116897 -1

1 Sequence

Length
1148

1 Sequence Ontology Term

Identifier Name Description
transcript