WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G9A.8.1 Sequence Name  Y48G9A.8.1
Length (nt)  1560   Chromosome Location  III: 2102295-2107497
Chromosome . Primary Identifier  III Chromosome Location . Start  2102295
Chromosome Location . End  2107497 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G9A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004088 ppk-2 Y48G9A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G9A.8 Y48G9A.8 1206   III: 2102317-2102499

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G9A.8.1 2102295 2107497 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80795   205   III: 2102295-2102499 Caenorhabditis elegans
Exon80796   243   III: 2102718-2102960 Caenorhabditis elegans
Exon80797   113   III: 2103820-2103932 Caenorhabditis elegans
Exon80798   287   III: 2104725-2105011 Caenorhabditis elegans
Exon80799   335   III: 2106025-2106359 Caenorhabditis elegans
Exon80800   377   III: 2107121-2107497 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G9A.8.1 2102295 2107497 1

1 Sequence

Length
1560

1 Sequence Ontology Term

Identifier Name Description
transcript