WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3B.1a.1 Sequence Name  Y39A3B.1a.1
Length (nt)  1116   Chromosome Location  III: 2006029-2009196
Chromosome . Primary Identifier  III Chromosome Location . Start  2006029
Chromosome Location . End  2009196 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021436 Y39A3B.1 Y39A3B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3B.1a Y39A3B.1a 1116   III: 2006029-2006153

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3B.1a.1 2006029 2009196 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80615   125   III: 2006029-2006153 Caenorhabditis elegans
Exon80616   103   III: 2006932-2007034 Caenorhabditis elegans
Exon80618   112   III: 2007110-2007221 Caenorhabditis elegans
Exon80620   125   III: 2007269-2007393 Caenorhabditis elegans
Exon80622   153   III: 2007468-2007620 Caenorhabditis elegans
Exon80624   101   III: 2007675-2007775 Caenorhabditis elegans
Exon80626   111   III: 2007832-2007942 Caenorhabditis elegans
Exon80628   95   III: 2008102-2008196 Caenorhabditis elegans
Exon80631   191   III: 2009006-2009196 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3B.1a.1 2006029 2009196 1

1 Sequence

Length
1116

1 Sequence Ontology Term

Identifier Name Description
transcript