WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3B.2a.1 Sequence Name  Y39A3B.2a.1
Length (nt)  1239   Chromosome Location  III: 1997882-2002438
Chromosome . Primary Identifier  III Chromosome Location . Start  1997882
Chromosome Location . End  2002438 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3B.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021437 lgc-42 Y39A3B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3B.2a Y39A3B.2a 1239   III: 1997882-1997916

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3B.2a.1 1997882 2002438 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80597   35   III: 1997882-1997916 Caenorhabditis elegans
Exon80600   145   III: 1998266-1998410 Caenorhabditis elegans
Exon80602   304   III: 1999266-1999569 Caenorhabditis elegans
Exon80604   347   III: 2000579-2000925 Caenorhabditis elegans
Exon80606   67   III: 2001446-2001512 Caenorhabditis elegans
Exon80608   129   III: 2001756-2001884 Caenorhabditis elegans
Exon80611   144   III: 2002116-2002259 Caenorhabditis elegans
Exon80612   68   III: 2002371-2002438 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3B.2a.1 1997882 2002438 1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript