WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53A3.4d.1 Sequence Name  F53A3.4d.1
Length (nt)  3523   Chromosome Location  III: 1919571-1939568
Chromosome . Primary Identifier  III Chromosome Location . Start  1919571
Chromosome Location . End  1939568 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A3.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004128 pqn-41 F53A3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A3.4d F53A3.4d 1284   III: 1933265-1933302

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53A3.4d.1 1919571 1939568 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80445   330   III: 1919571-1919900 Caenorhabditis elegans
Exon80454   273   III: 1927677-1927949 Caenorhabditis elegans
Exon80458   368   III: 1929106-1929473 Caenorhabditis elegans
Exon80464   550   III: 1930738-1931287 Caenorhabditis elegans
Exon80470   413   III: 1931962-1932374 Caenorhabditis elegans
Exon80474   105   III: 1933198-1933302 Caenorhabditis elegans
Exon80479   340   III: 1934184-1934523 Caenorhabditis elegans
Exon80485   174   III: 1936367-1936540 Caenorhabditis elegans
Exon80490   420   III: 1937681-1938100 Caenorhabditis elegans
Exon80494   550   III: 1939019-1939568 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53A3.4d.1 1919571 1939568 1

1 Sequence

Length
3523

1 Sequence Ontology Term

Identifier Name Description
transcript