WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53A3.4a.1 Sequence Name  F53A3.4a.1
Length (nt)  6293   Chromosome Location  III: 1905958-1939569
Chromosome . Primary Identifier  III Chromosome Location . Start  1905958
Chromosome Location . End  1939569 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004128 pqn-41 F53A3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A3.4a F53A3.4a 6045   III: 1905967-1906011

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53A3.4a.1 1905958 1939569 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80402   54   III: 1905958-1906011 Caenorhabditis elegans
Exon80405   208   III: 1906060-1906267 Caenorhabditis elegans
Exon80408   582   III: 1906341-1906922 Caenorhabditis elegans
Exon80411   197   III: 1907802-1907998 Caenorhabditis elegans
Exon80414   135   III: 1908187-1908321 Caenorhabditis elegans
Exon80417   159   III: 1909285-1909443 Caenorhabditis elegans
Exon80420   252   III: 1910279-1910530 Caenorhabditis elegans
Exon80423   192   III: 1911127-1911318 Caenorhabditis elegans
Exon80426   207   III: 1912917-1913123 Caenorhabditis elegans
Exon80429   259   III: 1914173-1914431 Caenorhabditis elegans
Exon80432   161   III: 1915463-1915623 Caenorhabditis elegans
Exon80435   488   III: 1915729-1916216 Caenorhabditis elegans
Exon80438   244   III: 1916946-1917189 Caenorhabditis elegans
Exon80441   66   III: 1917239-1917304 Caenorhabditis elegans
Exon80451   273   III: 1927677-1927949 Caenorhabditis elegans
Exon80455   368   III: 1929106-1929473 Caenorhabditis elegans
Exon80462   550   III: 1930738-1931287 Caenorhabditis elegans
Exon80468   413   III: 1931962-1932374 Caenorhabditis elegans
Exon80477   340   III: 1934184-1934523 Caenorhabditis elegans
Exon80483   174   III: 1936367-1936540 Caenorhabditis elegans
Exon80488   420   III: 1937681-1938100 Caenorhabditis elegans
Exon80495   551   III: 1939019-1939569 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53A3.4a.1 1905958 1939569 1

1 Sequence

Length
6293

1 Sequence Ontology Term

Identifier Name Description
transcript