WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A3CR.1a Sequence Name  Y39A3CR.1a
Length (nt)  765   Chromosome Location  III: 1878373-1878606
Chromosome . Primary Identifier  III Chromosome Location . Start  1878373
Chromosome Location . End  1878606
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CR.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32964 SMI-1, isoform a 29.4 254 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00103033
WBRNAi00020360
WBRNAi00103032

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y39A3CR.1a 1878373 1878606 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004886 smi-1 Y39A3CR.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y39A3CR.1a 1878373 1878606 1
CDS:Y39A3CR.1a 1879244 1879372 1
CDS:Y39A3CR.1a 1879437 1879571 1
CDS:Y39A3CR.1a 1880185 1880339 1
CDS:Y39A3CR.1a 1880636 1880747 1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A3CR.1a.1 Y39A3CR.1a.1 892   III: 1878365-1880866