WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CR.1b.1 Sequence Name  Y39A3CR.1b.1
Length (nt)  868   Chromosome Location  III: 1878365-1880866
Chromosome . Primary Identifier  III Chromosome Location . Start  1878365
Chromosome Location . End  1880866 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CR.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004886 smi-1 Y39A3CR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CR.1b Y39A3CR.1b 741   III: 1878373-1878606

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CR.1b.1 1878365 1880866 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80351   242   III: 1878365-1878606 Caenorhabditis elegans
Exon80353   129   III: 1879244-1879372 Caenorhabditis elegans
Exon80356   111   III: 1879437-1879547 Caenorhabditis elegans
Exon80361   155   III: 1880185-1880339 Caenorhabditis elegans
Exon80367   231   III: 1880636-1880866 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CR.1b.1 1878365 1880866 1

1 Sequence

Length
868

1 Sequence Ontology Term

Identifier Name Description
transcript