WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CR.3b.1 Sequence Name  Y39A3CR.3b.1
Length (nt)  1728   Chromosome Location  III: 1870307-1877000
Chromosome . Primary Identifier  III Chromosome Location . Start  1870307
Chromosome Location . End  1877000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CR.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021444 ttc-7 Y39A3CR.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CR.3b Y39A3CR.3b 1728   III: 1870307-1870338

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CR.3b.1 1870307 1877000 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80334   32   III: 1870307-1870338 Caenorhabditis elegans
Exon80336   317   III: 1870393-1870709 Caenorhabditis elegans
Exon80338   100   III: 1871710-1871809 Caenorhabditis elegans
Exon80340   359   III: 1871919-1872277 Caenorhabditis elegans
Exon80342   312   III: 1873718-1874029 Caenorhabditis elegans
Exon80344   236   III: 1874526-1874761 Caenorhabditis elegans
Exon80346   188   III: 1875983-1876170 Caenorhabditis elegans
Exon80347   184   III: 1876817-1877000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CR.3b.1 1870307 1877000 1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
transcript