WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CL.1a.1 Sequence Name  Y39A3CL.1a.1
Length (nt)  2184   Chromosome Location  III: 1834513-1846764
Chromosome . Primary Identifier  III Chromosome Location . Start  1834513
Chromosome Location . End  1846764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021440 rexd-1 Y39A3CL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CL.1a Y39A3CL.1a 2046   III: 1834520-1834606

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3CL.1a.1 1834513 1846764 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80287   94   III: 1834513-1834606 Caenorhabditis elegans
Exon80289   74   III: 1836133-1836206 Caenorhabditis elegans
Exon80291   103   III: 1836264-1836366 Caenorhabditis elegans
Exon80293   142   III: 1837119-1837260 Caenorhabditis elegans
Exon80295   369   III: 1838346-1838714 Caenorhabditis elegans
Exon80297   113   III: 1838776-1838888 Caenorhabditis elegans
Exon80299   329   III: 1840169-1840497 Caenorhabditis elegans
Exon80301   157   III: 1841754-1841910 Caenorhabditis elegans
Exon80303   234   III: 1842870-1843103 Caenorhabditis elegans
Exon80304   151   III: 1844373-1844523 Caenorhabditis elegans
Exon80307   418   III: 1846347-1846764 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39A3CL.1a.1 1834513 1846764 1

1 Sequence

Length
2184

1 Sequence Ontology Term

Identifier Name Description
transcript