WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CL.7a.1 Sequence Name  Y39A3CL.7a.1
Length (nt)  1940   Chromosome Location  III: 1824919-1834384
Chromosome . Primary Identifier  III Chromosome Location . Start  1824919
Chromosome Location . End  1834384 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021443 Y39A3CL.7 Y39A3CL.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CL.7a Y39A3CL.7a 1446   III: 1824926-1824976

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.7a.1 1824919 1834384 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80270   58   III: 1824919-1824976 Caenorhabditis elegans
Exon80272   256   III: 1825156-1825411 Caenorhabditis elegans
Exon80274   128   III: 1827239-1827366 Caenorhabditis elegans
Exon80276   128   III: 1830466-1830593 Caenorhabditis elegans
Exon80278   56   III: 1830666-1830721 Caenorhabditis elegans
Exon80279   132   III: 1830787-1830918 Caenorhabditis elegans
Exon80281   439   III: 1831815-1832253 Caenorhabditis elegans
Exon80283   192   III: 1833390-1833581 Caenorhabditis elegans
Exon80285   551   III: 1833834-1834384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.7a.1 1824919 1834384 1

1 Sequence

Length
1940

1 Sequence Ontology Term

Identifier Name Description
transcript