WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CL.6.1 Sequence Name  Y39A3CL.6.1
Length (nt)  1222   Chromosome Location  III: 1821149-1824314
Chromosome . Primary Identifier  III Chromosome Location . Start  1821149
Chromosome Location . End  1824314 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004249 pvf-1 Y39A3CL.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CL.6 Y39A3CL.6 915   III: 1821200-1821423

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.6.1 1821149 1824314 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80261   275   III: 1821149-1821423 Caenorhabditis elegans
Exon80262   85   III: 1821484-1821568 Caenorhabditis elegans
Exon80263   108   III: 1821615-1821722 Caenorhabditis elegans
Exon80265   78   III: 1822665-1822742 Caenorhabditis elegans
Exon80266   218   III: 1822800-1823017 Caenorhabditis elegans
Exon80267   118   III: 1823654-1823771 Caenorhabditis elegans
Exon80268   340   III: 1823975-1824314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.6.1 1821149 1824314 -1

1 Sequence

Length
1222

1 Sequence Ontology Term

Identifier Name Description
transcript