WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CL.2.1 Sequence Name  Y39A3CL.2.1
Length (nt)  4368   Chromosome Location  III: 1788333-1807147
Chromosome . Primary Identifier  III Chromosome Location . Start  1788333
Chromosome Location . End  1807147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006513 rimb-1 Y39A3CL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CL.2 Y39A3CL.2 3831   III: 1789084-1789454

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.2.1 1788333 1807147 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80206   73   III: 1788333-1788405 Caenorhabditis elegans
Exon80208   418   III: 1789037-1789454 Caenorhabditis elegans
Exon80209   130   III: 1790789-1790918 Caenorhabditis elegans
Exon80211   73   III: 1791090-1791162 Caenorhabditis elegans
Exon80213   152   III: 1792719-1792870 Caenorhabditis elegans
Exon80215   115   III: 1793639-1793753 Caenorhabditis elegans
Exon80217   149   III: 1794120-1794268 Caenorhabditis elegans
Exon80220   124   III: 1795270-1795393 Caenorhabditis elegans
Exon80223   177   III: 1798660-1798836 Caenorhabditis elegans
Exon80225   273   III: 1799508-1799780 Caenorhabditis elegans
Exon80227   232   III: 1800254-1800485 Caenorhabditis elegans
Exon80229   88   III: 1801913-1802000 Caenorhabditis elegans
Exon80231   128   III: 1802056-1802183 Caenorhabditis elegans
Exon80233   370   III: 1803085-1803454 Caenorhabditis elegans
Exon80235   242   III: 1804154-1804395 Caenorhabditis elegans
Exon80237   733   III: 1804592-1805324 Caenorhabditis elegans
Exon80239   212   III: 1806019-1806230 Caenorhabditis elegans
Exon80241   187   III: 1806290-1806476 Caenorhabditis elegans
Exon80243   63   III: 1806523-1806585 Caenorhabditis elegans
Exon80245   429   III: 1806719-1807147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.2.1 1788333 1807147 1

1 Sequence

Length
4368

1 Sequence Ontology Term

Identifier Name Description
transcript