WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CL.4a.1 Sequence Name  Y39A3CL.4a.1
Length (nt)  1450   Chromosome Location  III: 1772517-1777608
Chromosome . Primary Identifier  III Chromosome Location . Start  1772517
Chromosome Location . End  1777608 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021442 Y39A3CL.4 Y39A3CL.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CL.4a Y39A3CL.4a 1236   III: 1772646-1772831

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.4a.1 1772517 1777608 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80182   315   III: 1772517-1772831 Caenorhabditis elegans
Exon80184   253   III: 1773998-1774250 Caenorhabditis elegans
Exon80187   263   III: 1774861-1775123 Caenorhabditis elegans
Exon80190   123   III: 1775505-1775627 Caenorhabditis elegans
Exon80193   104   III: 1775898-1776001 Caenorhabditis elegans
Exon80196   139   III: 1777087-1777225 Caenorhabditis elegans
Exon80199   147   III: 1777271-1777417 Caenorhabditis elegans
Exon80202   106   III: 1777503-1777608 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.4a.1 1772517 1777608 -1

1 Sequence

Length
1450

1 Sequence Ontology Term

Identifier Name Description
transcript