WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39A3CL.4c.1 Sequence Name  Y39A3CL.4c.1
Length (nt)  1345   Chromosome Location  III: 1772516-1777417
Chromosome . Primary Identifier  III Chromosome Location . Start  1772516
Chromosome Location . End  1777417 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021442 Y39A3CL.4 Y39A3CL.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A3CL.4c Y39A3CL.4c 1215   III: 1772646-1772831

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.4c.1 1772516 1777417 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80181   316   III: 1772516-1772831 Caenorhabditis elegans
Exon80186   253   III: 1773998-1774250 Caenorhabditis elegans
Exon80189   263   III: 1774861-1775123 Caenorhabditis elegans
Exon80192   123   III: 1775505-1775627 Caenorhabditis elegans
Exon80195   104   III: 1775898-1776001 Caenorhabditis elegans
Exon80198   139   III: 1777087-1777225 Caenorhabditis elegans
Exon80201   147   III: 1777271-1777417 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39A3CL.4c.1 1772516 1777417 -1

1 Sequence

Length
1345

1 Sequence Ontology Term

Identifier Name Description
transcript