WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y22D7AL.8a Sequence Name  Y22D7AL.8a
Length (nt)  1023   Chromosome Location  III: 1583469-1583501
Chromosome . Primary Identifier  III Chromosome Location . Start  1583469
Chromosome Location . End  1583501
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26501 SMS-3, isoform a 38.2 340 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00002138
WBRNAi00055673

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y22D7AL.8a 1583469 1583501 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004894 sms-3 Y22D7AL.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y22D7AL.8a 1583469 1583501 -1
CDS:Y22D7AL.8a 1584627 1584888 -1
CDS:Y22D7AL.8a 1585847 1586070 -1
CDS:Y22D7AL.8a 1587809 1588062 -1
CDS:Y22D7AL.8a 1589153 1589402 -1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y22D7AL.8a.1 Y22D7AL.8a.1 1666   III: 1583155-1601144
Transcript:Y22D7AL.8a.5 Y22D7AL.8a.5 1378   III: 1583158-1589446
Transcript:Y22D7AL.8a.4 Y22D7AL.8a.4 1467   III: 1583158-1590344
Transcript:Y22D7AL.8a.3 Y22D7AL.8a.3 1566   III: 1583158-1595897
Transcript:Y22D7AL.8a.2 Y22D7AL.8a.2 1583   III: 1583158-1599473