WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71D11A.1a.1 Sequence Name  Y71D11A.1a.1
Length (nt)  8920   Chromosome Location  III: 1152044-1181147
Chromosome . Primary Identifier  III Chromosome Location . Start  1152044
Chromosome Location . End  1181147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71D11A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022103 cdh-12 Y71D11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71D11A.1a Y71D11A.1a 8682   III: 1152044-1152107

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71D11A.1a.1 1152044 1181147 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79195   64   III: 1152044-1152107 Caenorhabditis elegans
Exon79196   161   III: 1152761-1152921 Caenorhabditis elegans
Exon79197   333   III: 1153419-1153751 Caenorhabditis elegans
Exon79198   159   III: 1154550-1154708 Caenorhabditis elegans
Exon79199   513   III: 1154772-1155284 Caenorhabditis elegans
Exon79200   306   III: 1157010-1157315 Caenorhabditis elegans
Exon79201   1107   III: 1157959-1159065 Caenorhabditis elegans
Exon79203   117   III: 1160350-1160466 Caenorhabditis elegans
Exon79207   132   III: 1164037-1164168 Caenorhabditis elegans
Exon79209   165   III: 1164509-1164673 Caenorhabditis elegans
Exon79213   217   III: 1164935-1165151 Caenorhabditis elegans
Exon79215   292   III: 1165449-1165740 Caenorhabditis elegans
Exon79217   346   III: 1166064-1166409 Caenorhabditis elegans
Exon79220   384   III: 1167109-1167492 Caenorhabditis elegans
Exon79222   117   III: 1167555-1167671 Caenorhabditis elegans
Exon79225   483   III: 1168950-1169432 Caenorhabditis elegans
Exon79227   638   III: 1169967-1170604 Caenorhabditis elegans
Exon79229   1744   III: 1171665-1173408 Caenorhabditis elegans
Exon79235   178   III: 1176995-1177172 Caenorhabditis elegans
Exon79237   138   III: 1177217-1177354 Caenorhabditis elegans
Exon79239   452   III: 1177711-1178162 Caenorhabditis elegans
Exon79241   317   III: 1178914-1179230 Caenorhabditis elegans
Exon79243   153   III: 1179601-1179753 Caenorhabditis elegans
Exon79245   121   III: 1180677-1180797 Caenorhabditis elegans
Exon79248   283   III: 1180865-1181147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71D11A.1a.1 1152044 1181147 1

1 Sequence

Length
8920

1 Sequence Ontology Term

Identifier Name Description
transcript