WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0412.3a.1 Sequence Name  B0412.3a.1
Length (nt)  3352   Chromosome Location  III: 795136-809436
Chromosome . Primary Identifier  III Chromosome Location . Start  795136
Chromosome Location . End  809436 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0412.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015173 trpp-11 B0412.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0412.3a B0412.3a 3273   III: 795139-795254

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0412.3a.1 795136 809436 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78437   119   III: 795136-795254 Caenorhabditis elegans
Exon78438   92   III: 795302-795393 Caenorhabditis elegans
Exon78439   190   III: 795440-795629 Caenorhabditis elegans
Exon78440   415   III: 796294-796708 Caenorhabditis elegans
Exon78441   292   III: 797152-797443 Caenorhabditis elegans
Exon78444   254   III: 797769-798022 Caenorhabditis elegans
Exon78447   294   III: 798338-798631 Caenorhabditis elegans
Exon78449   188   III: 799587-799774 Caenorhabditis elegans
Exon78451   306   III: 800634-800939 Caenorhabditis elegans
Exon78453   259   III: 801367-801625 Caenorhabditis elegans
Exon78456   334   III: 802955-803288 Caenorhabditis elegans
Exon78459   109   III: 803332-803440 Caenorhabditis elegans
Exon78462   160   III: 806107-806266 Caenorhabditis elegans
Exon78465   63   III: 806513-806575 Caenorhabditis elegans
Exon78469   98   III: 807904-808001 Caenorhabditis elegans
Exon78474   70   III: 808053-808122 Caenorhabditis elegans
Exon78482   109   III: 809328-809436 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0412.3a.1 795136 809436 1

1 Sequence

Length
3352

1 Sequence Ontology Term

Identifier Name Description
transcript