WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G9.5a.1 Sequence Name  F42G9.5a.1
Length (nt)  2156   Chromosome Location  III: 774321-778154
Chromosome . Primary Identifier  III Chromosome Location . Start  774321
Chromosome Location . End  778154 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000117 alh-11 F42G9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G9.5a F42G9.5a 2064   III: 774393-774523

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42G9.5a.1 774321 778154 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78367   203   III: 774321-774523 Caenorhabditis elegans
Exon78370   77   III: 774574-774650 Caenorhabditis elegans
Exon78373   238   III: 774700-774937 Caenorhabditis elegans
Exon78376   666   III: 774986-775651 Caenorhabditis elegans
Exon78379   261   III: 775962-776222 Caenorhabditis elegans
Exon78382   145   III: 776861-777005 Caenorhabditis elegans
Exon78385   566   III: 777589-778154 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42G9.5a.1 774321 778154 -1

1 Sequence

Length
2156

1 Sequence Ontology Term

Identifier Name Description
transcript