WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F5.1a.1 Sequence Name  C09F5.1a.1
Length (nt)  1949   Chromosome Location  III: 658709-662732
Chromosome . Primary Identifier  III Chromosome Location . Start  658709
Chromosome Location . End  662732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015647 C09F5.1 C09F5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F5.1a C09F5.1a 1713   III: 658726-658948

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09F5.1a.1 658709 662732 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77959   240   III: 658709-658948 Caenorhabditis elegans
Exon77960   186   III: 659238-659423 Caenorhabditis elegans
Exon77961   205   III: 659522-659726 Caenorhabditis elegans
Exon77963   210   III: 660447-660656 Caenorhabditis elegans
Exon77965   301   III: 660859-661159 Caenorhabditis elegans
Exon77967   138   III: 661243-661380 Caenorhabditis elegans
Exon77969   148   III: 661756-661903 Caenorhabditis elegans
Exon77971   142   III: 661968-662109 Caenorhabditis elegans
Exon77974   379   III: 662354-662732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09F5.1a.1 658709 662732 1

1 Sequence

Length
1949

1 Sequence Ontology Term

Identifier Name Description
transcript