WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F5.2a.2 Sequence Name  C09F5.2a.2
Length (nt)  1297   Chromosome Location  III: 647347-654463
Chromosome . Primary Identifier  III Chromosome Location . Start  647347
Chromosome Location . End  654463 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F5.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015648 orai-1 C09F5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F5.2a C09F5.2a 894   III: 647574-647640

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09F5.2a.2 647347 654463 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77943   294   III: 647347-647640 Caenorhabditis elegans
Exon77946   70   III: 648198-648267 Caenorhabditis elegans
Exon77948   162   III: 649379-649540 Caenorhabditis elegans
Exon77951   285   III: 653254-653538 Caenorhabditis elegans
Exon77954   226   III: 653611-653836 Caenorhabditis elegans
Exon77958   260   III: 654204-654463 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09F5.2a.2 647347 654463 1

1 Sequence

Length
1297

1 Sequence Ontology Term

Identifier Name Description
transcript