WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55B1AR.2c.1 Sequence Name  Y55B1AR.2c.1
Length (nt)  2182   Chromosome Location  III: 587183-598141
Chromosome . Primary Identifier  III Chromosome Location . Start  587183
Chromosome Location . End  598141 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1AR.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021906 Y55B1AR.2 Y55B1AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1AR.2c Y55B1AR.2c 1563   III: 588267-588372

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1AR.2c.1 587183 598141 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77824   560   III: 587183-587742 Caenorhabditis elegans
Exon77827   129   III: 588244-588372 Caenorhabditis elegans
Exon77832   241   III: 591389-591629 Caenorhabditis elegans
Exon77836   178   III: 591966-592143 Caenorhabditis elegans
Exon77843   197   III: 593927-594123 Caenorhabditis elegans
Exon77847   645   III: 595249-595893 Caenorhabditis elegans
Exon77850   115   III: 596646-596760 Caenorhabditis elegans
Exon77855   117   III: 598025-598141 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1AR.2c.1 587183 598141 -1

1 Sequence

Length
2182

1 Sequence Ontology Term

Identifier Name Description
transcript