WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55B1AR.2d.1 Sequence Name  Y55B1AR.2d.1
Length (nt)  1744   Chromosome Location  III: 587179-598119
Chromosome . Primary Identifier  III Chromosome Location . Start  587179
Chromosome Location . End  598119 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1AR.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021906 Y55B1AR.2 Y55B1AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1AR.2d Y55B1AR.2d 1143   III: 588267-588372

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1AR.2d.1 587179 598119 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77823   564   III: 587179-587742 Caenorhabditis elegans
Exon77828   129   III: 588244-588372 Caenorhabditis elegans
Exon77833   241   III: 591389-591629 Caenorhabditis elegans
Exon77837   178   III: 591966-592143 Caenorhabditis elegans
Exon77840   225   III: 593371-593595 Caenorhabditis elegans
Exon77844   197   III: 593927-594123 Caenorhabditis elegans
Exon77851   115   III: 596646-596760 Caenorhabditis elegans
Exon77854   95   III: 598025-598119 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1AR.2d.1 587179 598119 -1

1 Sequence

Length
1744

1 Sequence Ontology Term

Identifier Name Description
transcript