WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55B1BR.1.1 Sequence Name  Y55B1BR.1.1
Length (nt)  2336   Chromosome Location  III: 440226-444056
Chromosome . Primary Identifier  III Chromosome Location . Start  440226
Chromosome Location . End  444056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1BR.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021911 affl-1 Y55B1BR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1BR.1 Y55B1BR.1 1527   III: 440320-440328

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1BR.1.1 440226 444056 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77594   103   III: 440226-440328 Caenorhabditis elegans
Exon77595   211   III: 440563-440773 Caenorhabditis elegans
Exon77596   64   III: 441158-441221 Caenorhabditis elegans
Exon77597   398   III: 441473-441870 Caenorhabditis elegans
Exon77598   223   III: 441920-442142 Caenorhabditis elegans
Exon77599   133   III: 442243-442375 Caenorhabditis elegans
Exon77600   153   III: 442425-442577 Caenorhabditis elegans
Exon77601   137   III: 442891-443027 Caenorhabditis elegans
Exon77602   914   III: 443143-444056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1BR.1.1 440226 444056 1

1 Sequence

Length
2336

1 Sequence Ontology Term

Identifier Name Description
transcript