WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55B1BR.2.1 Sequence Name  Y55B1BR.2.1
Length (nt)  2555   Chromosome Location  III: 434891-440142
Chromosome . Primary Identifier  III Chromosome Location . Start  434891
Chromosome Location . End  440142 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1BR.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021912 affl-2 Y55B1BR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1BR.2 Y55B1BR.2 2223   III: 434911-434968

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1BR.2.1 434891 440142 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77583   78   III: 434891-434968 Caenorhabditis elegans
Exon77584   77   III: 435035-435111 Caenorhabditis elegans
Exon77585   274   III: 435870-436143 Caenorhabditis elegans
Exon77586   106   III: 436619-436724 Caenorhabditis elegans
Exon77587   701   III: 436826-437526 Caenorhabditis elegans
Exon77589   229   III: 438130-438358 Caenorhabditis elegans
Exon77590   130   III: 438409-438538 Caenorhabditis elegans
Exon77591   252   III: 438699-438950 Caenorhabditis elegans
Exon77592   137   III: 439258-439394 Caenorhabditis elegans
Exon77593   571   III: 439572-440142 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1BR.2.1 434891 440142 1

1 Sequence

Length
2555

1 Sequence Ontology Term

Identifier Name Description
transcript