WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55B1BM.1c.1 Sequence Name  Y55B1BM.1c.1
Length (nt)  1335   Chromosome Location  III: 410441-418749
Chromosome . Primary Identifier  III Chromosome Location . Start  410441
Chromosome Location . End  418749 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1BM.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021910 stim-1 Y55B1BM.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1BM.1c Y55B1BM.1c 1188   III: 410531-410645

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1BM.1c.1 410441 418749 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77552   205   III: 410441-410645 Caenorhabditis elegans
Exon77557   141   III: 411249-411389 Caenorhabditis elegans
Exon77560   180   III: 412091-412270 Caenorhabditis elegans
Exon77563   158   III: 413879-414036 Caenorhabditis elegans
Exon77566   243   III: 416948-417190 Caenorhabditis elegans
Exon77569   144   III: 417604-417747 Caenorhabditis elegans
Exon77573   125   III: 418089-418213 Caenorhabditis elegans
Exon77576   139   III: 418611-418749 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55B1BM.1c.1 410441 418749 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
transcript