WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55B1BM.1a.1 Sequence Name  Y55B1BM.1a.1
Length (nt)  1930   Chromosome Location  III: 408127-418738
Chromosome . Primary Identifier  III Chromosome Location . Start  408127
Chromosome Location . End  418738 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55B1BM.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021910 stim-1 Y55B1BM.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55B1BM.1a Y55B1BM.1a 1593   III: 408418-408574

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55B1BM.1a.1 408127 418738 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77546   448   III: 408127-408574 Caenorhabditis elegans
Exon77547   122   III: 408913-409034 Caenorhabditis elegans
Exon77549   83   III: 409914-409996 Caenorhabditis elegans
Exon77551   60   III: 410347-410406 Caenorhabditis elegans
Exon77553   98   III: 410548-410645 Caenorhabditis elegans
Exon77555   141   III: 411249-411389 Caenorhabditis elegans
Exon77558   180   III: 412091-412270 Caenorhabditis elegans
Exon77561   158   III: 413879-414036 Caenorhabditis elegans
Exon77564   243   III: 416948-417190 Caenorhabditis elegans
Exon77567   144   III: 417604-417747 Caenorhabditis elegans
Exon77571   125   III: 418089-418213 Caenorhabditis elegans
Exon77574   128   III: 418611-418738 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55B1BM.1a.1 408127 418738 -1

1 Sequence

Length
1930

1 Sequence Ontology Term

Identifier Name Description
transcript