WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C4.1.1 Sequence Name  F54C4.1.1
Length (nt)  666   Chromosome Location  III: 87559-89243
Chromosome . Primary Identifier  III Chromosome Location . Start  87559
Chromosome Location . End  89243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018793 mrpl-40 F54C4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C4.1 F54C4.1 570   III: 87564-87686

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54C4.1.1 87559 89243 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76992   128   III: 87559-87686 Caenorhabditis elegans
Exon76993   131   III: 87765-87895 Caenorhabditis elegans
Exon76994   67   III: 87939-88005 Caenorhabditis elegans
Exon76995   165   III: 88048-88212 Caenorhabditis elegans
Exon76996   175   III: 89069-89243 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54C4.1.1 87559 89243 1

1 Sequence

Length
666

1 Sequence Ontology Term

Identifier Name Description
transcript