WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199773 Gene Name  Y46E12BL.8
Sequence Name  ? Y46E12BL.8 Organism  Caenorhabditis elegans
Automated Description  Enriched in I4 neuron; I5 neuron; M3L; M5 neuron; and MI neuron based on single-cell RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 109
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199773

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46E12BL.8 Y46E12BL.8 109   II: 15255469-15255577
 

Other

0 CDSs

0 RNAi Result

4 Allele

Public Name
gk963297
gk964061
gk963594
WBVar00557887

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199773 15255469 15255577 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrII_15255578..15257370   1793 II: 15255578-15257370 Caenorhabditis elegans

5 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Single-cell RNA-Seq cell group 59_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:59_0
  Single-cell RNA-Seq cell group 96_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:96_0
  Single-cell RNA-Seq cell group 125_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:125_0
  Single-cell RNA-Seq cell group 105_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:105_0
  Single-cell RNA-Seq cell group 124_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:124_0

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199773 15255469 15255577 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
109

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrII_15255437..15255468   32 II: 15255437-15255468 Caenorhabditis elegans