WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.28.1 Sequence Name  Y53F4B.28.1
Length (nt)  2728   Chromosome Location  II: 15158180-15163614
Chromosome . Primary Identifier  II Chromosome Location . Start  15158180
Chromosome Location . End  15163614 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.28.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004234 ptr-20 Y53F4B.28 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.28 Y53F4B.28 2583   II: 15158183-15158251

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.28.1 15158180 15163614 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76704   72   II: 15158180-15158251 Caenorhabditis elegans
Exon76705   162   II: 15158686-15158847 Caenorhabditis elegans
Exon76706   81   II: 15158893-15158973 Caenorhabditis elegans
Exon76707   410   II: 15159073-15159482 Caenorhabditis elegans
Exon76708   112   II: 15159608-15159719 Caenorhabditis elegans
Exon76709   167   II: 15160002-15160168 Caenorhabditis elegans
Exon76710   80   II: 15160227-15160306 Caenorhabditis elegans
Exon76711   365   II: 15160358-15160722 Caenorhabditis elegans
Exon76712   273   II: 15161149-15161421 Caenorhabditis elegans
Exon76713   319   II: 15161867-15162185 Caenorhabditis elegans
Exon76714   236   II: 15162262-15162497 Caenorhabditis elegans
Exon76715   451   II: 15163164-15163614 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.28.1 15158180 15163614 1

1 Sequence

Length
2728

1 Sequence Ontology Term

Identifier Name Description
transcript