WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.21.1 Sequence Name  Y53F4B.21.1
Length (nt)  3438   Chromosome Location  II: 15090180-15109008
Chromosome . Primary Identifier  II Chromosome Location . Start  15090180
Chromosome Location . End  15109008 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.21.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013167 wshc-4 Y53F4B.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.21 Y53F4B.21 3438   II: 15090180-15090320

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.21.1 15090180 15109008 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76589   141   II: 15090180-15090320 Caenorhabditis elegans
Exon76590   163   II: 15091217-15091379 Caenorhabditis elegans
Exon76591   139   II: 15092382-15092520 Caenorhabditis elegans
Exon76592   138   II: 15092589-15092726 Caenorhabditis elegans
Exon76593   118   II: 15093645-15093762 Caenorhabditis elegans
Exon76594   106   II: 15094735-15094840 Caenorhabditis elegans
Exon76595   422   II: 15097309-15097730 Caenorhabditis elegans
Exon76596   346   II: 15099555-15099900 Caenorhabditis elegans
Exon76597   56   II: 15101244-15101299 Caenorhabditis elegans
Exon76598   89   II: 15101352-15101440 Caenorhabditis elegans
Exon76599   97   II: 15102022-15102118 Caenorhabditis elegans
Exon76600   96   II: 15102507-15102602 Caenorhabditis elegans
Exon76601   80   II: 15103104-15103183 Caenorhabditis elegans
Exon76602   101   II: 15103236-15103336 Caenorhabditis elegans
Exon76603   662   II: 15103995-15104656 Caenorhabditis elegans
Exon76605   530   II: 15107151-15107680 Caenorhabditis elegans
Exon76606   154   II: 15108855-15109008 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53F4B.21.1 15090180 15109008 1

1 Sequence

Length
3438

1 Sequence Ontology Term

Identifier Name Description
transcript