WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53F4B.13a.1 Sequence Name  Y53F4B.13a.1
Length (nt)  3661   Chromosome Location  II: 15026114-15037854
Chromosome . Primary Identifier  II Chromosome Location . Start  15026114
Chromosome Location . End  15037854 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53F4B.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013160 cmtr-1 Y53F4B.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.13a Y53F4B.13a 2757   II: 15026196-15026204

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y53F4B.13a.1 15026114 15037854 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76515   91   II: 15026114-15026204 Caenorhabditis elegans
Exon76519   171   II: 15026263-15026433 Caenorhabditis elegans
Exon76523   372   II: 15026489-15026860 Caenorhabditis elegans
Exon76528   881   II: 15027948-15028828 Caenorhabditis elegans
Exon76531   319   II: 15030067-15030385 Caenorhabditis elegans
Exon76537   429   II: 15032759-15033187 Caenorhabditis elegans
Exon76539   214   II: 15034484-15034697 Caenorhabditis elegans
Exon76541   234   II: 15035549-15035782 Caenorhabditis elegans
Exon76545   950   II: 15036905-15037854 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y53F4B.13a.1 15026114 15037854 1

1 Sequence

Length
3661

1 Sequence Ontology Term

Identifier Name Description
transcript