WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.12a.1 Sequence Name  Y54E2A.12a.1
Length (nt)  1566   Chromosome Location  II: 14798472-14800966
Chromosome . Primary Identifier  II Chromosome Location . Start  14798472
Chromosome Location . End  14800966 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013196 tbc-20 Y54E2A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.12a Y54E2A.12a 1236   II: 14798486-14798587

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E2A.12a.1 14798472 14800966 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76131   116   II: 14798472-14798587 Caenorhabditis elegans
Exon76132   106   II: 14798637-14798742 Caenorhabditis elegans
Exon76133   182   II: 14798795-14798976 Caenorhabditis elegans
Exon76134   193   II: 14799031-14799223 Caenorhabditis elegans
Exon76135   460   II: 14799279-14799738 Caenorhabditis elegans
Exon76136   67   II: 14800409-14800475 Caenorhabditis elegans
Exon76139   442   II: 14800525-14800966 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E2A.12a.1 14798472 14800966 1

1 Sequence

Length
1566

1 Sequence Ontology Term

Identifier Name Description
transcript