WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.2.1 Sequence Name  Y54E2A.2.1
Length (nt)  1622   Chromosome Location  II: 14746890-14752489
Chromosome . Primary Identifier  II Chromosome Location . Start  14746890
Chromosome Location . End  14752489 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013188 smg-9 Y54E2A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.2 Y54E2A.2 1158   II: 14747909-14748053

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E2A.2.1 14746890 14752489 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76042   436   II: 14746890-14747325 Caenorhabditis elegans
Exon76045   173   II: 14747881-14748053 Caenorhabditis elegans
Exon76048   307   II: 14748868-14749174 Caenorhabditis elegans
Exon76052   169   II: 14749797-14749965 Caenorhabditis elegans
Exon76056   306   II: 14751117-14751422 Caenorhabditis elegans
Exon76060   231   II: 14752259-14752489 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E2A.2.1 14746890 14752489 -1

1 Sequence

Length
1622

1 Sequence Ontology Term

Identifier Name Description
transcript